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The thing is it's not really a "documentation" but just a collection of configs.
I have organized my containers in groups like you did ("arrs", web server, bitwarden, ...) and then made a repository for each group.
Each repository contains at least a compose file and a Gitlab CI file where a aimple pipeline is defined with basically "compose pull" and "compose up". There are alao more complicated repository where I build my own image.
The whole "Git" management is really transparent, because with Gitlab you can edit directly on the platform in a hosted VSCode environment where you can directlY edit your files and when your satisfied you just press commit. I don't do weird stuff with branches, pushing and pulling at all. No need for local copies of the repository.
If you want to fulltext search all your repos, I can recommend a "Sourcegraph" container, but use version 4.4.2 because starting with 4.5.0 they have limited the number of private reositories to 1. But this is something for later, when your infrastructure has grown.